
Microbial Bioinformatics is a rapidly changing field marrying computer science and microbiology. Join us as we share some tips and tricks we’ve learnt over the years. If you’re student just getting to grips to the field, or someone who just wants to keep tabs on the latest and greatest - this podcast is for you. The hosts are Dr. Lee - a bioinformatician in the United States, Dr. Nabil-Fareed Alik... more
| Publishes | Twice monthly | Episodes | 155 | Founded | 7 years ago |
|---|---|---|---|---|---|
| Number of Listeners | Category | Science | |||

In this follow-up Software Deep Dive episode, we continue our conversation with Dr. Bede Constantinides (University of Birmingham) about the design and implementation of Deacon, a fast host-read removal tool for metagenomics. Deacon uses minimizers a... more
In this Software Deep Dive episode, we talk with Dr. Bede Constantinides (University of Birmingham) about Deacon, a tool for removing host DNA reads from metagenomic datasets. We discuss why host read removal is a deceptively difficult problem, the l... more
In this episode, Lee, Nabil, and Andrew experiment with “vibe coding” bioinformatics tools using AI coding assistants. The goal: quickly build useful genomics utilities that run entirely in the browser via WebAssembly, without requiring command-line ... more
Join hosts Kieren Sharma (Artificially Ever After podcast, University of Bristol) and Andrew Page (MicroBinfie podcast, Origin Sciences) for a compelling live panel discussion exploring the dynamic intersection of artificial intelligence and the bios... more
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Thank you for the wonderful podcast. It’s great to hear how other researchers in the field are solving common problems.
As a neophyte trying navigate into the field of microbial bioinformatics this has helped and entertained! Best of both worlds.
Thank you very much for this podcast. As someone who has only just started in this field in the last couple of years - coming from a more traditional microbiology background - this podcast is providing a great deal of very valuable insight. It does exactly as aimed, which is to help the listener by filling in many of the unspoken bits of knowledge that one is somehow supposed to acquire. Many fields in biology could do with this, it is staggering how many times things are not written down an... more
The hosts are knowledgeable and well respected in the field. They are honest and straightforward, and I was engaged all through the first episode. So much so that on my crowded streetcar ride, I immediately started listening to episode 2, after texting a colleague that he should give it a whirl.
The topics that I have heard so far have been relevant and interesting. I think people will be enriched by this. Quite often, we just need to hear that we are on the right track - or not, and maybe thi... more
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A tech-forward, research-centric show that deep dives into microbial bioinformatics tools, workflows, and real-world data challenges. Episodes often feature expert guests discussing genome decontamination, host read depletion, pan-genomes, and browser-based tooling for bioinformatics, with a consistent focus on practical implementation, benchmarking, and community data sharing. The hosts bring years of experience in academic and industry settings, offering candid debates on workflow management, data privacy, and the evolving landscape of public health genomics. The show stands out for its hands-on technical rigor, openness to new tools like WebAssembly, and a collaborative, conversational style that benefits researchers, students, and pract... more
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Micro binfie podcast launched 7 years ago and published 155 episodes to date. You can find more information about this podcast including rankings, audience demographics and engagement in our podcast database.
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Recent guests on Micro binfie podcast include:
1. Bede Constantinides
2. Mr. Arthur Shem
3. Dr. Emma Hodcroft
4. Dr. Theo Sanderson
5. Arthur Shem Kasambula
6. Finlay Maguire
7. Sara Zufan
8. Torsten Siemen
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