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the bioinformatics lab

The Bioinformatics Lab
Bioinformatics
Public Health
Public Health Surveillance
Career Development
Data Analysis
Development Environments
Dengue Virus
Sars-Cov-2
Cloud Computing
Life Sciences
Software Engineering Practices
Galaxy
Pathogen Genomics
Genomic Epidemiology
Covid-19
Global Microbial Identifier
Collaboration
Microbiology
Hackathons
Rapid Prototyping

Ramblings on all things bioinformatics.

PublishesTwice monthlyEpisodes69Founded2 years ago
Number of ListenersCategory
Science

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Artwork for the bioinformatics lab

Latest Episodes

Summary In this conversation, Anita shares her experiences in critical patient care, emphasizing the importance of timely clinical alerts and collaboration among healthcare professionals. She recounts a specific case involving a 12-year-old girl post... more

In this episode of the Bioinformatics Lab Podcast, Christie Rose Woodside shares her journey from academia to industry, her experiences during the COVID-19 pandemic, and her decision to walk El Camino with her father. The conversation explores the im... more

In this episode of the Bioinformatics Lab Podcast, Mxolisi Nene shares his journey from a curious kid “scanning soil” with a stick and a broken Pentium II in rural KwaZulu-Natal to a bioinformatician and PhD candidate at the Agricultural Research Cou... more

In this episode of the Bioinformatics Lab Podcast, Zachary Konkel shares his journey from studying chemistry to specializing in mycology and bioinformatics. He discusses the significance of fungi in medicine, particularly in producing antimicrobial c... more

Summary In this episode of the Bioinformatics Lab podcast, James Oteno shares his journey as a bioinformatician and genomic epidemiologist, discussing the intersection of bioinformatics and public health, particularly in the context of emerging patho... more

Summary In this engaging conversation, Kaylie Zapanta, a PhD in neurophysiology, discusses her journey from academia to her current role at MyDog, where she focuses on veterinary diagnostics through NGS data. The discussion highlights the complexitie... more

In this episode of the Bioinformatics Lab Podcast, Janina Krumbeck shares her unique journey from Germany to the United States, detailing her academic experiences and the challenges she faced during her PhD program. She discusses the importance of me... more

In this conversation, Amy Gaskin shares her journey into bioinformatics, detailing her transition from an ecological background to a career in public health. She discusses the pivotal moments that led her to discover her passion for bioinformatics, t... more

Key Facts

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Number of Listeners
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People also subscribe to these shows.

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Recent Guests

James Otieno
Bioinformatician and genomic epidemiologist based in Kilifi, Kenya
World Health Organization (WHO)
Episode: EP 62: Public Health Pathogen Genomics in Africa with James Otieno
Janina Krumbeck
Microbiome Scientist and Co-founder of MiDog
MiDog
Episode: EP 60: NGS for Veterinary Diagnostics with Janina Krumbeck (MiDog)
Amy Gaskin
Public health professional with experience in bioinformatics and genomic epidemiology
Public Health Wales
Episode: EP 59: Navigating Bioinformatics and Public Health with Amy Gaskin
Gültekin Ünal
Pathogen genomics expert and veteran microbiologist
Episode: EP 58: From Veterinary Medicine to Pathogen Genomics with Gültekin Ünal
Dr. Momo Vuyisich
Chief Scientific Officer at Viome, focused on microbiome research and its link to human health.
Viome
Episode: EP 55: Microbiome and Human Health with Momo Vuyisich
Alex Sundermann
Expert in pathogen genomics and infection prevention
UPMC
Episode: EP 54: Pathogen Genomics in Healthcare w/ Alex Sundermann
Julian Paganini
Bioinformatician with a background in biotechnology and experience in sequence analysis.
Utrecht University
Episode: Ep 44: Career Focus:Julian Paganini & Olinto Linares-Perdomo
Olinto Linares-Perdomo
Bioinformatics professional with expertise in mathematical modeling and particle behavior.
Department of Health, Utah
Episode: Ep 44: Career Focus:Julian Paganini & Olinto Linares-Perdomo
Dr. Alan Christoffels
Principal investigator for the Public Health Alliance for Genomic Epidemiology
Public Health Alliance for Genomic Epidemiology
Episode: Ep 34: PHA4GE with Dr. Alan Christoffels

Host

Kevin Libuit
Host of conversations centered around bioinformatics, technology, and its applications in health and research.

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Talking Points

Recent interactions between the hosts and their guests.

EP 59: Navigating Bioinformatics and Public Health with Amy Gaskin
Q: What do you consider are those core skill sets of bioinformatics?
Being able to answer biological problems with computer science solutions, particularly in analyzing large data sets.
EP 60: NGS for Veterinary Diagnostics with Janina Krumbeck (MiDog)
Q: What drove you to finish that program?
I think to some degree, my personality, like I started this, I moved an ocean away. Like I gave up a lot to move to Nebraska, I'm like, I'm gonna see this through.
EP 55: Microbiome and Human Health with Momo Vuyisich
Q: How do you guide nutritional recommendations based on transcriptomic data?
Viome identifies pathways that are over or underactive and suggests foods that provide necessary substrates to balance these pathways.
EP 55: Microbiome and Human Health with Momo Vuyisich
Q: How does Viome evaluate what constitutes a healthy microbiome?
Viome looks at a combination of metabolic activities through gene expression profiles, comparing against their database of healthy levels to recommend dietary changes.
EP 55: Microbiome and Human Health with Momo Vuyisich
Q: What role does gene expression play in the context of the microbiome?
Gene expression is crucial as it reflects the actual biochemical activities of the microbiome rather than just genetic potential, providing insights into health impacts and interactions.

Audience Metrics

Listeners, social reach, demographics and more for this podcast.

Listeners per Episode
Gender Skew
Location
Interests
Professions
Age Range
Household Income
Social Media Reach

Frequently Asked Questions About the bioinformatics lab

What is the bioinformatics lab about and what kind of topics does it cover?

Focused on the dynamic field of bioinformatics, this content brings together a range of topics including pathogen genomics, microbiome research, and the integration of genomics into public health. Notable discussions cover the advancements in next-generation sequencing for both human and veterinary diagnostics, emphasizing the impact of genomics on understanding infectious diseases. The host frequently engages with experts across various sectors, from public health organizations to biotech startups, adding depth to the conversations around technological advancements and their applications in health and disease management. Unique aspects of this series include reflections on evolving professional landscapes, working conditions, and the integ... more

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1. The Bioinformatics CRO Podcast

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the bioinformatics lab launched 2 years ago and published 69 episodes to date. You can find more information about this podcast including rankings, audience demographics and engagement in our podcast database.

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What guests have appeared on the bioinformatics lab?

Recent guests on the bioinformatics lab include:

1. James Otieno
2. Janina Krumbeck
3. Amy Gaskin
4. Gültekin Ünal
5. Dr. Momo Vuyisich
6. Alex Sundermann
7. Julian Paganini
8. Olinto Linares-Perdomo

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