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Base by Base

Gustavo Barra
TRMT1
Preterm Birth
Structural Variation
Splice-Altering Variants
Genomics
Neurodevelopmental Disorder
MUTYH
Cell-Free DNA
Genetic Disorders
CXCL12
Cell-Free DNA (cfdna)
Trna
High-Resolution Variant Frequencies
NOMADSV
Antisense Oligonucleotides
Guidelines For Pathogenic DNA Variants
Colorectal Cancer
Genetics
BRCA1
Blood Collection

Base by Base explores advances in genetics and genomics, with a focus on gene-disease associations, variant interpretation, protein structure, and insights from exome and genome sequencing. Each episode breaks down key studies and their clinical relevance—one base at a time. Powered by AI, Base by Base offers a new way to learn on the go. Special thanks to authors who publish under CC BY 4.0, maki... more

PublishesDailyEpisodes148Founded5 months ago
Number of ListenersCategories
Life SciencesHealth & FitnessMedicineScience

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Artwork for Base by Base

Latest Episodes

️ Episode 148: Systematic Minigene-Based Splicing Analysis and Tentative Clinical Classification of 52 CHEK2 Splice-Site Variants

In this episode of PaperCast Base by Base, we explore a comprehensive functional assessment of splice-site variants in... more

️ Episode 147: Comprehensive Annotation of Complete ABO Alleles and Resolution of ABO Variants

In this episode of PaperCast Base by Base, we explore a groundbreaking study that introduces an improved long-read sequencing method to fully resolve ABO... more

️ Episode 146: Automated and Decentralized Genomic Profiling of Plasma Cell-Free DNA in Solid Tumors

In this episode of PaperCast Base by Base, we explore the clinical feasibility of an automated and decentralized cfDNA sequencing system designed t... more

️ Episode 145: A Validated Highly Sensitive Microsatellite Instability Assay Identifies PMS2 Variants in CMMRD

In this episode of PaperCast Base by Base, we explore a study that validates a next-generation sequencing-based highly sensitive microsat... more

️ Episode 144: Revised time estimation of the ancestral human chromosome 2 fusion

In this episode of PaperCast Base by Base, we explore a study that revisits one of the most defining events in human evolution: the fusion that gave rise to chromosom... more

️ Episode 143: The genetic history of the Southern Caucasus: 5,000 years of continuity despite high mobility

In this episode of PaperCast Base by Base, we explore a comprehensive archaeogenomic study tracing 230 ancient individuals from Georgia and... more

️ Episode 142: Specifications of the ACMG/AMP Guidelines for PALB2 Variant Interpretation

In this episode of PaperCast Base by Base, we explore how the Hereditary Breast, Ovarian, and Pancreatic Cancer Variant Curation Expert Panel (HBOP VCEP) deve... more

️ Episode 141: RetiGene, a comprehensive gene atlas for inherited retinal diseases

In this episode of PaperCast Base by Base, we explore RetiGene, an expert-curated resource that consolidates genetic, transcriptomic, and functional information on i... more

Key Facts

Contact Information
Podcast Host
Number of Listeners
Find out how many people listen to this podcast per episode and each month.

Recent Guests

Anna Axakova
A researcher actively working on SOD1 variants and ALS.
University of Toronto
Episode: 140: Landscapes of missense variant impact for human superoxide dismutase 1
Megan Ding
A researcher contributing to the understanding of SOD1 gene.
University of Pittsburgh
Episode: 140: Landscapes of missense variant impact for human superoxide dismutase 1
Jacques Fellay
Lead researcher at Ecole Polytechnique Federale de Lausanne
Ecole Polytechnique Federale de Lausanne
Episode: 139: MosCoverY: A new method to estimate mosaic loss of Y chromosome from sequencing coverage data
Dr. Lucas da Silva
Lead researcher and contributor to the study on the qPCR assay for Monkeypox.
Sabin Diagnóstico e Saúde
Episode: ️ 61: Monkeypox on the Frontline — Developing Brazil’s First qPCR Diagnostic Assay
Elena Fusari
Lead researcher of the study on aneuploid cells
Cell Genomics
Episode: ️ 58: Aneuploid Cells and Cellular Battles — How Cell Interactions Shape Genome Integrity
Daniel Chavez-Yenter
Co-author of the study regarding genetic testing intentions in Latino populations.
Genetics in Medicine
Episode: ️ 29: Rethinking Agency for Genetic Testing Intention among Latinos — Determining Predictors of Intention for Carrier Screening and Cancer Predisposition Testing
Kimberly A. Kaphingst
Co-author of the study regarding genetic testing intentions in Latino populations.
Genetics in Medicine
Episode: ️ 29: Rethinking Agency for Genetic Testing Intention among Latinos — Determining Predictors of Intention for Carrier Screening and Cancer Predisposition Testing
Pamela E. Rios Coronado
First author of the research discussing coronary artery anatomy and genetics
Episode: ️4: Shaping the Heart: How CXCL12 Drives Coronary Artery Anatomy

Hosts

Unknown
Host of Base by Base.
Co-host
Co-host discussing various episodes.

Chart Rankings

How this podcast ranks in the Apple Podcasts, Spotify and YouTube charts.

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The Naked Scientists PodcastThe Naked Scientists

Talking Points

Recent interactions between the hosts and their guests.

133: Culture-Independent Meta‑Pangenomics Reveals Gut Genome Links to Child Growth
Q: What were the main findings in relation to microbial diversity and childhood growth?
Children experiencing linear growth faltering exhibited higher microbial richness but also higher genome instability, linking microbial health to growth outcomes.
133: Culture-Independent Meta‑Pangenomics Reveals Gut Genome Links to Child Growth
Q: How did the research team improve upon previous methods of studying gut microbiomes?
They utilized culture-independent metapanogenomics and long-read sequencing to recover complete microbial genomes, allowing them to analyze genetic variations more effectively and in significant detail.
133: Culture-Independent Meta‑Pangenomics Reveals Gut Genome Links to Child Growth
Q: What were researchers missing with the older techniques when studying pediatric undernutrition?
Researchers previously focused on static measurements and 16S RNA gene sequencing, which provided a broad overview but lacked crucial details necessary to understand the full genetic potential of gut microbes.
️ 76: Whole-genome Ancestry of an Old Kingdom Egyptian
Q: What were the big implications of this study?
It challenges the notion of early Egypt as genetically isolated and provides evidence for human migration in the context of cultural and technological exchange.
️ 76: Whole-genome Ancestry of an Old Kingdom Egyptian
Q: So how did they succeed where others struggled? What was different this time?
They focused on an adult male whose unique burial preserved valuable DNA, allowing them to sequence a complete genome for this period.

Audience Metrics

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Listeners per Episode
Gender Skew
Location
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Professions
Age Range
Household Income
Social Media Reach

Frequently Asked Questions About Base by Base

What is Base by Base about and what kind of topics does it cover?

Exploring the forefront of genetic research, this podcast offers insights into gene-disease associations and the clinical significance of genomic discoveries. It discusses various aspects of genetics, including variant interpretation, protein structure, and the implications of exome and genome sequencing. Each episode presents a deep dive into key studies, showcasing recent advancements and innovative methodologies that inform clinical practices. The content is particularly noteworthy for its emphasis on accessibility, as it benefits from open-access scientific literature, making information more widely shareable and comprehensible for listeners, thereby supporting ongoing education in genomics.

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To see how many followers or subscribers Base by Base has on Spotify and other platforms such as Castbox and Podcast Addict, simply upgrade your account. You'll also find viewership figures for their YouTube channel if they have one.

How many episodes of Base by Base are there?

Base by Base launched 5 months ago and published 148 episodes to date. You can find more information about this podcast including rankings, audience demographics and engagement in our podcast database.

How do I contact Base by Base?

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What guests have appeared on Base by Base?

Recent guests on Base by Base include:

1. Anna Axakova
2. Megan Ding
3. Jacques Fellay
4. Dr. Lucas da Silva
5. Elena Fusari
6. Daniel Chavez-Yenter
7. Kimberly A. Kaphingst
8. Pamela E. Rios Coronado

To view more recent guests and their details, simply upgrade your Rephonic account. You'll also get access to a typical guest profile to help you decide if the show is worth pitching.

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